CGN onion and leek collection

The collection
In short- Genetic diversity
- 440 accessions
- Variaties from Europe, Asia and Africa
The Allium collection originates from the former Institute for Horticultural Plant Breeding (IVT). The IVT collection consisted mainly of onion and leek cultivars collected from Dutch seed firms in the framework of the European Cooperative Programme for Crop Genetic Resources Networks (Van der Meer and Van Bennekom 1983). After adopting this collection, much attention was given to rationalizing the collection by bulking duplicates. This effort resulted in a considerable reduction of the collection (Boukema and De Groot 1991).
The collection was expanded with material collected in a multicrop expedition in Pakistan (Hasmi et al. 1981), material collected in Bulgaria, accessions from multicrop expeditions funded by IPGRI in Egypt, from collecting missions in the framework of the German-Dutch cooperation in Plant Genetic Resources to Turkey, Russia (Daghestan), Armenia, and Georgia, from a multicrop collecting expedition to Uzbekistan (Van Soest et al. 1998) and from a collecting mission to Greece in 2009 (Kik 2009), the latter collection being part of the Special Collection of CGN.
The collection was completed with missing prominent open pollinated Dutch and European varieties and with material from the working collection of the CPRO-DLO. Wild material was also introduced from botanical gardens and from other genebanks. CGN actively participates in the Allium network of the European Cooperative Programme for Crop Genetic Resources Networks. The passport data of the CGN Allium collection are included in EURISCO and GENESYS. CGN gives high priority to the Allium collection and aims to create a representative sample of the total genetic diversity in onion and leek and its wild relatives in cooperation with other European genebanks. For a recent overview on global Allium genetic resources, see the article of Keller and Kik 2018.
The collection presently includes about 440 accessions of seed propagated Alliums:
- The onion collection consists mainly of varieties from the Netherlands and Japan.
- Also landraces from Egypt, Bulgaria, Russia, Pakistan and Uzbekistan are present in the collection and a few wild relatives, among which A. roylei.
- The bunching onions are nearly all varieties from Japan.
- The leek collection consists of cultivars from the Netherlands, France and Denmark, landraces from Bulgaria, and wild relatives of the ampeloprasum complex from Greece.
- The kurrats are landraces originating from Egypt.
- The Chinese chives are landraces from Thailand and Australia.
Characterisation and evaluation
Most of the Allium collection has been characterised for 15-20 traits, using descriptorlists developed by CGN (partly derived from UPOV and ECPGR descriptor lists). Cultivars are characterised during bulb/mature plant production for regeneration. Evaluation data on characters such as diseases are obtained in close cooperation with users of the material. Data on resistance to Peronospora destructor, Sclerotinium cepiforum, Botrytis aclada, B. squamosa, Puccinia porri and Thrips tabaci are available.
Regeneration of onion and leek
Constraints in regeneration are faced in the case of short day material, in particular material from Pakistan. Also regeneration of wild material sometimes causes difficulties. It can take several years before enough seed is produced to fulfil the CGN standards. For the regeneration of an accession 60-120 plants are used. After onion bulbs have been harvested, dried and potted, they are placed in a non-heated glasshouse for overwintering. Because of problems with Fusarium attack, seedlings of leek are planted directly in pots and overwintered from November onwards in a glasshouse at 5-10°C. As soon as flowers appear, the plants are transferred to isolation rooms and pollinated by blowflies.
Seed dormancy
None.
Vernalization
Onion is vernalized in the bulb stage. The degree of cold requirement is very dependent on the type of material.
Leek is vernalized in the mature vegetative plant stage. Potted plants over-winter in a glasshouse at 5-10°C.

Crop phenology
Planting
Onion is planted at the end of April. Two weeks before planting, the peat pots are placed on flat trays in a sheltered area in the open air for acclimatization. Planting distance: 8 x 40 cm (appr. 250 plants per accession). The short day cultivars are planted in early April.
Leek is transplanted directly into pots. This measurement is taken to prevent Fusarium attack, which can be serious, because of injuries during uprooting the plants from the field. Pots are placed outside in July. Per accession 80 plants are regenerated.
Sowing
Onion is sown in the first half of March in seed trays, or directly in peat pots. After germination seedlings, when appropriate, are transplanted to peat pots in greenhouses at a temperature of 14/10-12°C day/night. Short day cultivars are sown at the end of January. Short day cultivars that give serious problems with regeneration will be raised in the phytotron for flower initiation without bulb formation. Seeds are sown in August at 18° C, transplanted into pots and after the plants reach a diameter of about 7 mm transferred to 10° C and a day length of 14 hours.
Leek is sown in June in deep seed trays in a glasshouse at a temperature of 18-20°C. After one or two weeks the trays are placed in a glasshouse of 15°C.
Harvesting
Vegetative stage
For onion the bulbs are pulled out of the soil when at least 75% of the plants have dropped their foliage. The bulbs remain in the field until the leaves are completely dry (appr. 4 weeks). Leaf material and soil are then removed from the bulbs, which are put in boxes. After removing the bulbs from the field, they are dried under natural conditions in a well ventilated open greenhouse for 4 weeks. They are then potted and kept in a glasshouse for over-wintering at 5-10°C. The accessions of which the bulbs cannot be stored, are immediately desinfected and potted after harvesting.
Pots with leek plants are also transferred for over-wintering to a greenhouse at 5-10°C.
As soon as flowers appear, the plants are transferred to isolation rooms. As means of isolation, gauze screens are used to create compartments inside an unheated greenhouse. Insect pollination takes place by using blowflies.
Generative stage
Harvesting is carried out manually when the majority of plants of an accession have ripe seeds. If there are large differences in seed ripening between plants of one sample, the harvesting is done in phases. To prevent lodging, plants are staked. The entire inflorescence is harvested and put into labelled paper bags and directly transferred to the oasthouse for drying and cleaning.
Pest and disease control
Preventive
Seed and seedling pathogens
Bulb pathogens before potting (only short day onions)
Neck rot (Botrytis aclada) at the stage the foliage starts to fall in the field (onion)
Non-preventive
Downy mildew (Peronospera destructor) (onion)
Botrytis (Botrytis squamosa) (onion)
Rust (Puccinia allii) (leek)
White tip (Phytophthora porri) (leek)
Purple blotch (Alternaria porri) (leek)
Onion fly (Delia antigua) (onion and leek)
Thrips (Thrips tabaci) (onion and leek)
Aphids (onion)
Spider mites (onion)
Leek moth (Acrolepia asectella)(leek)
Weeds (onion and leek)
Wild species
The regeneration procedures for the wild related species of onion and leek can differ. Not enough experience has been obtained to give exact protocols. Some wild species with dormancy are sown in November, while those without dormancy are sown in January. Plants die off in June and their bulbs are stored and replanted in the autumn.
Boukema, I.W. & E.C. de Groot, 1991. Reduction of redundancy in the CGN Allium collection. Allium Improvement Newsletter 1: 25-26.
Gass, T. D. Astley, H.D. Rabinowitch and E.A. Frison, compilers, 1996. Report of a Working Group on Allium. Fifth meeting, 25-27 May 1995, Skierniewice, Poland. International Plant Genetic Resources Institute, Rome, Italy.
Hasmi, N.I., L.J.M. van Soest, A.R. Rao, M. Mesken and Zahoor Amad, 1981. Collecting in Baluchistan, Pakistan. Plant Genetic Resources Newsletter 47: 31-35.
Meer, Q.P. van der & J.L.van Bennekom, 1983. Collection of Onion- and Leek genotypes in the Netherlands. Internal IVT report, Wageningen.
Soest, L.J.M. van, K.I. Baimatov, V.F. Chapurin & A.P. Pimakhov, 1998. Multicrop collecting mission to Uzbekistan. Plant Genetic Recources Newsletter 116: 32-35.
Keller, E.R.J. & C. Kik (2018). Allium genetic resources. In: M. Shigyo, M Abdelrahman & A Khar (Eds.). The Allium genomes. Springer Nature, Cham, Switzerland. pp. 23-52. Kik C. (2009).
Report of a leek (Allium porrum) wild relatives collecting expedition in Greece. CGN report 15. CGN, Wageningen, the Netherlands. pp.17.
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R (Rik) Lievers, PhD
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